PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010932619.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 408aa    MW: 46055.4 Da    PI: 5.7114
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010932619.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.12.1e-33581971128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sg 81 
                     lp+G++F+P+d+el+++ L+k  +g+      ++  e+i++v+    i++++P++Lp  vk++ +  +fF+++ k+y+tg+rk+r+++     + 
  XP_010932619.1  58 LPRGVKFDPSDQELLWHLLAKVGQGDAkphpfIN--EFIPTVEegdgICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGTRKRRKINsddlgDV 149
                     799************7777766665557754422..33444423335**********.677888899******************8655555588 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+k+v+  +g++ g+kk++v+y  + + +k+ekt+Wvmh+y+l
  XP_010932619.1 150 RWHKTGKTKPVIM-DGKHQGCKKIMVLYmsTIKGEKPEKTNWVMHQYHL 197
                     9************.9999**********6633667777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.27E-3943216IPR003441NAC domain
PROSITE profilePS5100531.37158216IPR003441NAC domain
PfamPF023651.2E-1459197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MTGPSWLIDS KRIATKIKNA SEPVDSSRYK WMSNPTKACP RCNHIIDNSD VVQEWPGLPR  60
GVKFDPSDQE LLWHLLAKVG QGDAKPHPFI NEFIPTVEEG DGICYTHPQK LPGVKQDGSV  120
SHFFHRTFKA YNTGTRKRRK INSDDLGDVR WHKTGKTKPV IMDGKHQGCK KIMVLYMSTI  180
KGEKPEKTNW VMHQYHLGTG EDEKDGEYVV SKIFYQQQSK PGDKNGQDLT LEIVEAVVAE  240
VDPVANPKSV SSECHVGKQD PAHSPEQTSD QVKMYHENRV EEHNAPLECE KFDDQDNHPT  300
GDLKWWEGES QFLLDSQQLA EGIAICDEFL LSQSSCGGDE AKKSRPRLSD YAHMGAEDLK  360
KDLEACQNLS NYDRSNIELD PPQDFRLSQL EFGSQDSFLA WGGSKLAD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010932619.10.0PREDICTED: NAC domain-containing protein 8 isoform X1
SwissprotQ6NQK21e-153NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM0SCK00.0M0SCK0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P07330_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-148NAC family protein